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Exome Browser Manual
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Genome Browser Manual
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How to run the PhenGenVar Browser

1. Download the PhenGenVar Browser setup file and sample data from the Download page


2. Execute the setup file


3. Click the Next button

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4. Select the installation folder and click the Next button
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5. Click the Next button to start the installation
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6. After the installation is successfully completed, click the Close button to exit

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7. See the install icon on the desktop and double-click it to run the program


8. Unzip the sample data
....A. Sample read data : bam file
....B. Sample variant data : vcf file


9. Main Page of PhenGenVar Exome browser
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10. Select a Gene_Group or Phenotype to analyze and click the Search button
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11. Select and doucle-click a random gene/transcript to analyze
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12. Select and click a random variant and analyze the genetic information of the variant
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13. Double-click a random variant to call a Genome Browser and use it for a detailed analysis of that area
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※Refer to the manuals for detailed information on how to use the PhenGenVar Exome/Genome Browser.※


Database Laboratory, Department of Computer Engineering, Hallym University, 1 Hallymdaehak-gil, Chuncheon, Gangwon-do 200-702, Korea